منابع مشابه
Tagging gene and protein names in full text articles
Current information extraction efforts in the biomedical domain tend to focus on finding entities and facts in structured databases or MEDLINE abstracts. We apply a gene and protein name tagger trained on Medline abstracts (ABGene) to a randomly selected set of full text journal articles in the biomedical domain. We show the effect of adaptations made in response to the greater heterogeneity o...
متن کاملTagging gene and protein names in biomedical text
MOTIVATION The MEDLINE database of biomedical abstracts contains scientific knowledge about thousands of interacting genes and proteins. Automated text processing can aid in the comprehension and synthesis of this valuable information. The fundamental task of identifying gene and protein names is a necessary first step towards making full use of the information encoded in biomedical text. This ...
متن کاملABNER: an open source tool for automatically tagging genes, proteins and other entity names in text
ABNER (A Biomedical Named Entity Recognizer) is an open source software tool for molecular biology text mining. At its core is a machine learning system using conditional random fields with a variety of orthographic and contextual features. The latest version is 1.5, which has an intuitive graphical interface and includes two modules for tagging entities (e.g. protein and cell line) trained on ...
متن کاملLocation Tagging in Text
Location tagging, also known as geotagging, is the process of assigning geographical coordinates to input data. In this project we present an algorithm for location tagging text. Our algorithm makes use of previous work in natural language processing by using a state-of-the-art part-of-speech tagger and named entity recognizer to find blocks of text which may refer to locations. A knowledge bas...
متن کاملTagging Unknown Proper Names Using Decision Trees
This paper describes a supervised learning method to automatically select from a set of noun phrases, embedding proper names of different semantic classes, their most distinctive features. The result of the learning process is a decision tree which classifies an unknown proper name on the basis of its context of occurrence. This classifier is used to estimate the probability distribution of an ...
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ژورنال
عنوان ژورنال: Journal of Fundamental and Applied Sciences
سال: 2018
ISSN: 1112-9867
DOI: 10.4314/jfas.v9i5s.21